Yours is the typical description for “delayed ignition” in Frymaster’s High-Efficiency gas fryers. Although most often described as “popping”, in extreme cases – “booming” would be more accurate. Yes, the popping can be quite alarming and usually makes the oil in the fryer jump, so that might be what you’d described as bubbling.
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There’s nothing you as an operator can do for it except call a service company. That problem can be caused by any one of a fairly long list of issues within the fryer. The worst issue could potentially be cracked infrared burners. Since yours is a three bank set of fryers, you should at least try to narrow down which fryer is actually doing it. That way, when a technician from the service company shows up, you can point and say “THAT one”.
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To identify a company that can look at it, go to this link for Frymaster’s Authorized Service Agency Locator and type in your zip code.